== deficiency-1 (level 1, Lck const, ZAP const, MM kept) : 13 species, 2 minimal siphons
   ok  siphon {Complex, Complex_ITAM1_P, Complex_ITAM1_PP, Complex_ZAP, Complex_ZAP_ITAM2_P, Complex_ZAP_ITAM2_PP, Node10, Node12, Node3, Node6, TCR, TCR_ZAP}
   ok  siphon {Complex, Complex_ITAM1_P, Complex_ITAM1_PP, Complex_ZAP, Complex_ZAP_ITAM2_P, Complex_ZAP_ITAM2_PP, Node10, Node12, Node3, Node6, pMHC1}
   every minimal siphon contains the support of a nonnegative conservation law: True
== deficiency-1 (level 1, Lck const, ZAP dynamic, MM kept) : 14 species, 3 minimal siphons
   ok  siphon {Complex, Complex_ITAM1_P, Complex_ITAM1_PP, Complex_ZAP, Complex_ZAP_ITAM2_P, Complex_ZAP_ITAM2_PP, Node10, Node12, Node3, Node6, TCR, TCR_ZAP}
   ok  siphon {Complex, Complex_ITAM1_P, Complex_ITAM1_PP, Complex_ZAP, Complex_ZAP_ITAM2_P, Complex_ZAP_ITAM2_PP, Node10, Node12, Node3, Node6, pMHC1}
   ok  siphon {Complex_ZAP, Complex_ZAP_ITAM2_P, Complex_ZAP_ITAM2_PP, Node10, Node12, TCR_ZAP, ZAP70}
   every minimal siphon contains the support of a nonnegative conservation law: True
== deficiency-2 (level 2, Lck,ZAP const, MM collapsed) : 13 species, 2 minimal siphons
   ok  siphon {Complex, Complex_2ZAP, Complex_2ZAP_ITAM3_P, Complex_2ZAP_ITAM3_PP, Complex_ITAM1_P, Complex_ITAM1_PP, Complex_ZAP, Complex_ZAP_ITAM2_P, Complex_ZAP_ITAM2_PP, TCR, TCR_2ZAP, TCR_ZAP}
   ok  siphon {Complex, Complex_2ZAP, Complex_2ZAP_ITAM3_P, Complex_2ZAP_ITAM3_PP, Complex_ITAM1_P, Complex_ITAM1_PP, Complex_ZAP, Complex_ZAP_ITAM2_P, Complex_ZAP_ITAM2_PP, pMHC1}
   every minimal siphon contains the support of a nonnegative conservation law: True
== deficiency-3 (no CD8, Lck,ZAP const, MM kept) : 27 species, 2 minimal siphons
   ok  siphon {Complex, Complex_2ZAP, Complex_2ZAP_ITAM3_P, Complex_2ZAP_ITAM3_PP, Complex_3ZAP, Complex_3ZAP_2P, Complex_3ZAP_3P, Complex_3ZAP_P, Complex_ITAM1_P, Complex_ITAM1_PP, Complex_ZAP, Complex_ZAP_ITAM2_P, Complex_ZAP_ITAM2_PP, Node10, Node12, Node136, Node138, Node143, Node145, Node147, Node3, Node6, TCR, TCR_2ZAP, TCR_3ZAP, TCR_ZAP}
   ok  siphon {Complex, Complex_2ZAP, Complex_2ZAP_ITAM3_P, Complex_2ZAP_ITAM3_PP, Complex_3ZAP, Complex_3ZAP_2P, Complex_3ZAP_3P, Complex_3ZAP_P, Complex_ITAM1_P, Complex_ITAM1_PP, Complex_ZAP, Complex_ZAP_ITAM2_P, Complex_ZAP_ITAM2_PP, Node10, Node12, Node136, Node138, Node143, Node145, Node147, Node3, Node6, pMHC1}
   every minimal siphon contains the support of a nonnegative conservation law: True
== full Protocol S4 module (57 species) : 57 species, 5 minimal siphons
   ok  siphon {CD8, CD8Complex, CD8Complex_2ZAP, CD8Complex_2ZAP_ITAM3_P, CD8Complex_2ZAP_ITAM3_PP, CD8Complex_3ZAP, CD8Complex_3ZAP_2P, CD8Complex_3ZAP_3P, CD8Complex_3ZAP_P, CD8Complex_ITAM1_P, CD8Complex_ITAM1_PP, CD8Complex_ZAP, CD8Complex_ZAP_ITAM2_P, CD8Complex_ZAP_ITAM2_PP, CD8TCR_2ZAP, CD8TCR_ZAP, CD8_TCR, CD8_pMHC1, CDTCR_3ZAP, Node150, Node152, Node155, Node157, Node159, Node17, Node19, Node22, Node24}
   ok  siphon {CD8Complex, CD8Complex_2ZAP, CD8Complex_2ZAP_ITAM3_P, CD8Complex_2ZAP_ITAM3_PP, CD8Complex_3ZAP, CD8Complex_3ZAP_2P, CD8Complex_3ZAP_3P, CD8Complex_3ZAP_P, CD8Complex_ITAM1_P, CD8Complex_ITAM1_PP, CD8Complex_ZAP, CD8Complex_ZAP_ITAM2_P, CD8Complex_ZAP_ITAM2_PP, CD8TCR_2ZAP, CD8TCR_ZAP, CD8_TCR, CDTCR_3ZAP, Complex, Complex_2ZAP, Complex_2ZAP_ITAM3_P, Complex_2ZAP_ITAM3_PP, Complex_3ZAP, Complex_3ZAP_2P, Complex_3ZAP_3P, Complex_3ZAP_P, Complex_ITAM1_P, Complex_ITAM1_PP, Complex_ZAP, Complex_ZAP_ITAM2_P, Complex_ZAP_ITAM2_PP, Node10, Node12, Node136, Node138, Node143, Node145, Node147, Node150, Node152, Node155, Node157, Node159, Node17, Node19, Node22, Node24, Node3, Node6, TCR, TCR_2ZAP, TCR_3ZAP, TCR_ZAP}
   ok  siphon {Lck, Node10, Node12, Node136, Node138, Node143, Node145, Node147, Node3, Node6}
   ok  siphon {CD8Complex_2ZAP, CD8Complex_2ZAP_ITAM3_P, CD8Complex_2ZAP_ITAM3_PP, CD8Complex_3ZAP, CD8Complex_3ZAP_2P, CD8Complex_3ZAP_3P, CD8Complex_3ZAP_P, CD8Complex_ZAP, CD8Complex_ZAP_ITAM2_P, CD8Complex_ZAP_ITAM2_PP, CD8TCR_2ZAP, CD8TCR_ZAP, CDTCR_3ZAP, Complex_2ZAP, Complex_2ZAP_ITAM3_P, Complex_2ZAP_ITAM3_PP, Complex_3ZAP, Complex_3ZAP_2P, Complex_3ZAP_3P, Complex_3ZAP_P, Complex_ZAP, Complex_ZAP_ITAM2_P, Complex_ZAP_ITAM2_PP, Node10, Node12, Node136, Node138, Node143, Node145, Node147, Node150, Node152, Node155, Node157, Node159, Node22, Node24, TCR_2ZAP, TCR_3ZAP, TCR_ZAP, ZAP70}
   ok  siphon {CD8Complex, CD8Complex_2ZAP, CD8Complex_2ZAP_ITAM3_P, CD8Complex_2ZAP_ITAM3_PP, CD8Complex_3ZAP, CD8Complex_3ZAP_2P, CD8Complex_3ZAP_3P, CD8Complex_3ZAP_P, CD8Complex_ITAM1_P, CD8Complex_ITAM1_PP, CD8Complex_ZAP, CD8Complex_ZAP_ITAM2_P, CD8Complex_ZAP_ITAM2_PP, CD8_pMHC1, Complex, Complex_2ZAP, Complex_2ZAP_ITAM3_P, Complex_2ZAP_ITAM3_PP, Complex_3ZAP, Complex_3ZAP_2P, Complex_3ZAP_3P, Complex_3ZAP_P, Complex_ITAM1_P, Complex_ITAM1_PP, Complex_ZAP, Complex_ZAP_ITAM2_P, Complex_ZAP_ITAM2_PP, Node10, Node12, Node136, Node138, Node143, Node145, Node147, Node150, Node152, Node155, Node157, Node159, Node17, Node19, Node22, Node24, Node3, Node6, pMHC1}
   every minimal siphon contains the support of a nonnegative conservation law: True
