SBML file: abg_sd004_model.xml
species 57, SBML reactions 104, irreversible reactions 158
laws of the form a - b: 54
values of the reversible attribute: ['false']
(a) laws with a zero-valued alias in place of a reactant: 66 of 104
    mass-action terms affected: 90 of 158
    distinct alias names: 24; aliases standing for more than one species: none
    local parameter names equal to a species id: none
    every term without an alias matches its reactant list exactly: True (asserted)
(c) SBML reactions involving a CD8-containing species: 67 of 104 (CD8-free: 37)
    irreversible reactions involving CD8: 105 of 158 (CD8-free: 53)
(d) networks with no ZAP-70 docking level (k = 0):
    CD8 no  Lck dynamic             ZAP-70 dynamic  species  8 reactions 10 complexes  9 linkage classes 2 rank  5 deficiency 2 weakly reversible False
    CD8 no  Lck dynamic             ZAP-70 constant species  8 reactions 10 complexes  9 linkage classes 2 rank  5 deficiency 2 weakly reversible False
    CD8 no  Lck constant            ZAP-70 dynamic  species  7 reactions 10 complexes  6 linkage classes 1 rank  5 deficiency 0 weakly reversible True
    CD8 no  Lck constant            ZAP-70 constant species  7 reactions 10 complexes  6 linkage classes 1 rank  5 deficiency 0 weakly reversible True
    CD8 no  Lck constant, collapsed ZAP-70 dynamic  species  5 reactions  6 complexes  4 linkage classes 1 rank  3 deficiency 0 weakly reversible True
    CD8 no  Lck constant, collapsed ZAP-70 constant species  5 reactions  6 complexes  4 linkage classes 1 rank  3 deficiency 0 weakly reversible True
    CD8 yes Lck dynamic             ZAP-70 dynamic  species 16 reactions 34 complexes 23 linkage classes 5 rank 12 deficiency 6 weakly reversible False
    CD8 yes Lck dynamic             ZAP-70 constant species 16 reactions 34 complexes 23 linkage classes 5 rank 12 deficiency 6 weakly reversible False
    CD8 yes Lck constant            ZAP-70 dynamic  species 15 reactions 34 complexes 20 linkage classes 4 rank 12 deficiency 4 weakly reversible True
    CD8 yes Lck constant            ZAP-70 constant species 15 reactions 34 complexes 20 linkage classes 4 rank 12 deficiency 4 weakly reversible True
    CD8 yes Lck constant, collapsed ZAP-70 dynamic  species 13 reactions 30 complexes 18 linkage classes 4 rank 10 deficiency 4 weakly reversible True
    CD8 yes Lck constant, collapsed ZAP-70 constant species 13 reactions 30 complexes 18 linkage classes 4 rank 10 deficiency 4 weakly reversible True
    reactions of the CD8-free k = 0 network with Lck constant:
       Complex -> Node3
       Node3 -> Complex
       TCR + pMHC1 -> Complex
       Complex -> TCR + pMHC1
       Node6 -> Complex_ITAM1_PP
       Node3 -> Complex_ITAM1_P
       Complex_ITAM1_P -> Node6
       Node6 -> Complex_ITAM1_P
       Complex_ITAM1_P -> TCR + pMHC1
       Complex_ITAM1_PP -> TCR + pMHC1
